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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019652.1_2946_3602_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2946 - 3602

Intron Length:

657

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTAACGCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTCCTTAACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

77.7

30.1

Major BPS

87.3

0.93

0.8

36.5

Major PPT

66.6

0.37

62.1

39.4

Minor 5ss

31.6

-2.1

3.2

41.8

38.8

Minor BPS

93.1

1.21

0.9

91.67

27.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019152

Chromosome:

PEDO01019652.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030152

1748 - 6447

4700