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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019652.1_3769_4264_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3769 - 4264

Intron Length:

496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

TTGCAATTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGGAT

U12 Branch Point Sequence:

GTGGTTGCAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

62.1

38.7

Major BPS

59.7

0.24

1.5

59.7

46.7

Major PPT

67.2

0.39

0.9

58.8

41.8

Minor 5ss

27.9

-2.5

27.6

37.5

Minor BPS

-0.6

2.1

55.4

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019152

Chromosome:

PEDO01019652.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030152

1748 - 6447

4700