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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019738.1_2744_2959_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2744 - 2959

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCAACACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

TCTATCTCAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

71.6

40.2

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

65.4

0.35

58.3

36.2

Minor 5ss

34.1

-1.8

2.8

34.5

Minor BPS

63.1

0.41

1.6

71.99

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021091

Chromosome:

PEDO01019738.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026679

2248 - 5721

3474