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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019738.1_3071_3881_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3071 - 3881

Intron Length:

811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTATG

5'SS Class:

major

3'SS Sequence:

GGCTTTGTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

ACGTTCTTACCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

75.5

40.6

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

70.7

0.47

64.4

41.6

Minor 5ss

39.7

-1.2

3.1

50.7

40.1

Minor BPS

59.3

0.29

1.6

64.64

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021091

Chromosome:

PEDO01019738.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026679

2248 - 5721

3474