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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019782.1_5057_5141_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5057 - 5141

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CCCTGTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GTGCCCTGACCC

Flanking Amino Acid:

SDERDQDQWASLYPPIASDG

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

70.9

0.47

0.8

64.6

30.9

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

50.1

-0

1.8

61.79

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016961

Chromosome:

PEDO01019782.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037989

21 - 5914

5894

ENSAPLT00000036946

21 - 6099

6079