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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019782.1_5314_5698_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5314 - 5698

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTTCTCATAACC

Flanking Amino Acid:

SISEDSPQYQDVAEEYNQLK

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

72.2

37.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

86.6

0.82

0.8

80.9

Minor 5ss

37.9

-1.4

3.6

56.2

48.2

Minor BPS

61.8

0.35

1.7

72.45

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016961

Chromosome:

PEDO01019782.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037989

21 - 5914

5894

ENSAPLT00000036946

21 - 6099

6079