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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019782.1_5741_5997_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5741 - 5997

Intron Length:

257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TTCCACCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTCCAC

U12 Branch Point Sequence:

TGGGCGCTGACT

Flanking Amino Acid:

EYNQLKDLKRSPDYQTKKME

Intron Amino Acid Position:

476

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

40.2

Major BPS

49.8

-0

1.4

64.2

Major PPT

80.7

0.69

0.8

77.2

31.1

Minor 5ss

27.1

-2.6

2.9

24.3

36.8

Minor BPS

-0.3

2.4

64.44

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016961

Chromosome:

PEDO01019782.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036946

21 - 6099

6079