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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019782.1_8373_8879_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
8373 - 8879

Intron Length:
507

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTAGGTTGA

5'SS Class:
major

3'SS Sequence:
ATTCCCCCCGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTCCAT

U12 Branch Point Sequence:
CCTCCCCTAACC

Flanking Amino Acid:
CLKAIALFTPDACGLSDPAH

Intron Amino Acid Position:
319

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76
0.61
1.1
65.9
42.7

Major BPS
64.7
0.37
1.3
74.7
40

Major PPT
73.3
0.52
0.8
66.7
28.9

Minor 5ss
37.7
-1.4
3.1
40.4
45.8

Minor BPS
60.4
0.31
1.8
68.8
42.6

Associated Gene:

Gene:
NR2F6

Ensembl Gene ID:

Chromosome:
PEDO01019782.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8098 - 11505
3408

8098 - 11505
3408