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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019782.1_9405_10717_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
9405 - 10717

Intron Length:
1313

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACGCCG

5'SS Class:
major

3'SS Sequence:
GCTTCCCCCTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTCTGAC

U12 Branch Point Sequence:
GCGGTCTGACCC

Flanking Amino Acid:
KCFRVGMRKEAVQRGRIPPT

Intron Amino Acid Position:
144

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73
0.54
1.2
57.9
46.7

Major BPS
63.7
0.34
1.2
57
41.8

Major PPT
73.6
0.53
0.8
69.9
31

Minor 5ss
36.6
-1.5
3.3
48.4
47.3

Minor BPS
43.8
-0.4
1.8
46.78
42.7

Associated Gene:

Gene:
NR2F6

Ensembl Gene ID:

Chromosome:
PEDO01019782.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8098 - 11505
3408

8098 - 11505
3408