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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019787.1_392_1251_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

392 - 1251

Intron Length:

860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAACCA

5'SS Class:

major

3'SS Sequence:

CTCTCGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CCTTGCTCACCC

Flanking Amino Acid:

AAQLGLTQTQVKIWFQNKRS

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

58.8

40.3

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

71.6

0.49

0.8

65.1

30.6

Minor 5ss

30.5

-2.2

3.3

40.4

45.2

Minor BPS

45.7

-0.3

2.2

57.89

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030143

Chromosome:

PEDO01019787.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018111

140 - 1711

1572