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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019794.1_1705_2153_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1705 - 2153

Intron Length:

449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCGGGG

5'SS Class:

major

3'SS Sequence:

AGAGCGGGTGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCACAT

U12 Branch Point Sequence:

CGCCCCCGACCC

Flanking Amino Acid:

LDAASTVTREAPAEPSHSTC

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

43.3

Major BPS

52.8

0.07

1.1

60.5

36.2

Major PPT

49.4

-0

1.2

43.9

Minor 5ss

32.8

-2

3.8

46.4

Minor BPS

40.6

-0.7

1.9

46.2

42.1

Associated Gene:

Gene:

REEP6

Ensembl Gene ID:

ENSAPLG00000011207

Chromosome:

PEDO01019794.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011662

128 - 2191

2064