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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019801.1_1485_1589_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1485 - 1589

Intron Length:
105

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTGGGGACG

5'SS Class:
major

3'SS Sequence:
CTTTCCCCACCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCAGCAT

U12 Branch Point Sequence:
CTTTCCCCACCA

Flanking Amino Acid:
CLYIFTSGTTGLPKAARISH

Intron Amino Acid Position:
187

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.3
0.41
1.1
55.7
42.9

Major BPS
43.3
-0.4
1.5
47.7
45.7

Major PPT
74.7
0.56
0.9
67.4
33.8

Minor 5ss
25.9
-2.8
3.1
27.9
37.6

Minor BPS
48.5
-0.1
2.2
68.3
43.9

Associated Gene:

Gene:
SLC27A3

Ensembl Gene ID:

Chromosome:
PEDO01019801.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 3975
3955

21 - 3975
3955