Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019801.1_2242_2329_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2242 - 2329

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTGGGG

5'SS Class:

major

3'SS Sequence:

CCGCGCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GCATCCTGACAC

Flanking Amino Acid:

AVGRSSFIYKLFSPFEIVRY

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.7

0.3

1.1

47.8

42.6

Major BPS

68.9

0.47

59.2

39.1

Major PPT

63.5

0.3

0.9

53.3

36.7

Minor 5ss

22.2

-3.2

3.4

29.3

43.3

Minor BPS

47.1

-0.2

1.8

54.42

42.8

Associated Gene:

Gene:

SLC27A3

Ensembl Gene ID:

ENSAPLG00000026857

Chromosome:

PEDO01019801.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039043

21 - 3975

3955

ENSAPLT00000024963

21 - 3975

3955