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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019823.1_1220_2397_R

Intron Information:

Intron Rank:

141385

Intron Class:

major

Intron Phase:

Intron Coordinates:

1220 - 2397

Intron Length:

1178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTTCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ACACTTTTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

78.9

34.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

77.7

0.62

0.7

75.8

26.3

Minor 5ss

44.6

-0.6

2.5

57.8

40.7

Minor BPS

48.8

-0.1

1.5

54.25

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023422

Chromosome:

PEDO01019823.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042191

329 - 2867

2539