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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019875.1_6662_7216_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6662 - 7216

Intron Length:

555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCCGG

5'SS Class:

major

3'SS Sequence:

CATCCTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

CCCCCACTAACC

Flanking Amino Acid:

QPGVPFARSPRAQAMAASLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

50.9

47.3

Major BPS

64.5

0.36

65.2

28.2

Major PPT

71.9

0.49

0.8

64.9

30.4

Minor 5ss

32.3

-2

39.4

45.9

Minor BPS

45.9

-0.3

53.75

43.8

Associated Gene:

Gene:

HPDL

Ensembl Gene ID:

ENSAPLG00000026229

Chromosome:

PEDO01019875.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033242

5703 - 9407

3705