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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019877.1_375_470_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

375 - 470

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGGGGG

5'SS Class:

major

3'SS Sequence:

TCCGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAG

U12 Branch Point Sequence:

GCGGTGTCAGCC

Flanking Amino Acid:

YQTTYGGFTEESGDDEYRGD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

44.1

Major BPS

47.3

-0.1

1.7

57.1

49.4

Major PPT

71.7

0.49

0.8

65.3

30.5

Minor 5ss

22.1

-3.2

3.4

28.8

43.7

Minor BPS

35.5

-1.1

2.1

38.12

40.6

Associated Gene:

Gene:

VPS72

Ensembl Gene ID:

ENSAPLG00000015112

Chromosome:

PEDO01019877.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015750

21 - 2388

2368