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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019888.1_10400_10516_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10400 - 10516

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTACGGCGG

5'SS Class:

major

3'SS Sequence:

CCCTGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

AGCCGCTGAGCC

Flanking Amino Acid:

RQHFSATLAYKKLISVLTQY

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.37

1.1

49.1

47.1

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

70.9

0.47

0.8

64.6

30.9

Minor 5ss

30.8

-2.2

3.5

41.3

Minor BPS

41.9

-0.6

48.18

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004786

Chromosome:

PEDO01019888.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005136

75 - 51818

51744