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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019888.1_104879_108103_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

104879 - 108103

Intron Length:

3225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTGTAT

U12 Branch Point Sequence:

TTCCTCTTTACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

70.6

37.9

Major BPS

50.1

1.4

51.4

43.9

Major PPT

88.4

0.86

0.7

83.3

25.2

Minor 5ss

34.1

-1.8

3.1

44.9

43.1

Minor BPS

62.5

0.39

1.6

72.39

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003756

Chromosome:

PEDO01019888.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035658

92888 - 108356

15469

ENSAPLT00000003846

92888 - 108356

15469