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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019888.1_1351_2040_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1351 - 2040

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTCCT

5'SS Class:

major

3'SS Sequence:

CAGCACGGCACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCCCAG

U12 Branch Point Sequence:

CTGCCCAGCACG

Flanking Amino Acid:

EDKQHFIPVHLSVLLLAVGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

64.8

40.9

Major BPS

43.3

-0.4

1.6

52.1

45.2

Major PPT

49.9

-0

41.3

37.7

Minor 5ss

34.3

-1.8

3.1

52.6

43.7

Minor BPS

41.1

-0.8

2.1

46.63

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004786

Chromosome:

PEDO01019888.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005136

75 - 51818

51744