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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019888.1_160_1274_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160 - 1274

Intron Length:

1115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCAGG

5'SS Class:

major

3'SS Sequence:

TGTGCCGTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCCCAT

U12 Branch Point Sequence:

GGTGCAGCCACC

Flanking Amino Acid:

TGLRRPFGISVMDITDISKG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

59.7

46.7

Major BPS

50.9

0.02

1.3

60.4

37.5

Major PPT

0.52

65.5

Minor 5ss

32.9

-2

2.8

31.4

42.5

Minor BPS

34.1

-1.2

2.5

45.24

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004786

Chromosome:

PEDO01019888.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005136

75 - 51818

51744