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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019888.1_2220_2544_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2220 - 2544

Intron Length:

325

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAC

U12 Branch Point Sequence:

GAGACCTGACCC

Flanking Amino Acid:

KLGYPEVIMPGDVRNDIYLT

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.9

0.99

0.9

72.3

42.1

Major BPS

60.1

0.25

35.6

Major PPT

70.3

0.46

0.8

61.9

34.8

Minor 5ss

25.4

-2.8

4.1

37.8

47.1

Minor BPS

47.4

-0.2

1.8

54.38

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004786

Chromosome:

PEDO01019888.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005136

75 - 51818

51744