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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019888.1_22214_51352_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22214 - 51352

Intron Length:

29139

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCTGATCCA

5'SS Class:

weak_major

3'SS Sequence:

GTGCTTGACCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGACAA

U12 Branch Point Sequence:

CAGTGCTTGACC

Flanking Amino Acid:

STNCCPWLGWLLPPQSHYVA

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.6

0.06

1.4

49.3

40.7

Major BPS

48.3

-0.1

1.2

54.9

40.8

Major PPT

62.6

0.29

1.1

54.1

Minor 5ss

18.1

-3.7

3.4

16.7

28.3

Minor BPS

55.7

0.16

1.9

62.16

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004786

Chromosome:

PEDO01019888.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005136

75 - 51818

51744