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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019888.1_62645_62963_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62645 - 62963

Intron Length:

319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

TTGTGCCCACTC

Flanking Amino Acid:

RHTSLLRFAPASSQPLAARP

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

75.7

34.4

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

89.5

0.89

0.6

84.5

23.2

Minor 5ss

30.4

-2.2

3.5

42.4

45.1

Minor BPS

40.2

-0.7

2.3

54.82

43.8

Associated Gene:

Gene:

AUP1

Ensembl Gene ID:

ENSAPLG00000004504

Chromosome:

PEDO01019888.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004643

59886 - 69367

9482