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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019888.1_69060_69168_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

69060 - 69168

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTATATGTT

5'SS Class:

weak_major

3'SS Sequence:

TTCTCCGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTGAG

U12 Branch Point Sequence:

ACTTGAGGAAAC

Flanking Amino Acid:

YTCHAITVLYQFIVRVMCSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.4

0.27

1.1

65.3

38.7

Major BPS

51.1

0.03

1.5

51.1

44.3

Major PPT

0.56

0.8

69.9

Minor 5ss

46.3

-0.4

3.3

71.2

40.3

Minor BPS

35.9

-1

2.4

48.01

41.2

Associated Gene:

Gene:

AUP1

Ensembl Gene ID:

ENSAPLG00000004504

Chromosome:

PEDO01019888.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004643

59886 - 69367

9482