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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019888.1_78541_79080_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

78541 - 79080

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TGGCATGTGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TCCCTCTCACCT

Flanking Amino Acid:

AHSAKYGKGVGRIWLDNVNC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

38.4

Major BPS

72.7

0.56

30.1

Major PPT

0.2

1.2

53.7

45.5

Minor 5ss

30.9

-2.2

3.3

38.6

Minor BPS

-0

1.8

64.73

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003990

Chromosome:

PEDO01019888.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004129

68416 - 83249

14834