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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019888.1_94793_95929_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
94793 - 95929

Intron Length:
1137

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGACTC

5'SS Class:
strong_major

3'SS Sequence:
TGGGCTCTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGCTGAG

U12 Branch Point Sequence:
CAAGGCTGAGGT

Flanking Amino Acid:
LLRPLLPQDKGELYRMCREG

Intron Amino Acid Position:
762

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.5
0.86
0.8
75
35.2

Major BPS
43.9
-0.3
1.6
36.8
44.4

Major PPT
72.2
0.5
1
62
44.4

Minor 5ss
31.1
-2.2
3.2
41.7
45

Minor BPS
36.2
-0.9
2.1
46.46
45

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01019888.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

92888 - 108356
15469