Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019889.1_1478_1724_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1478 - 1724

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCCC

5'SS Class:

major

3'SS Sequence:

TGCCCCCGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACTAT

U12 Branch Point Sequence:

CCTGCCCTAACT

Flanking Amino Acid:

IMGQAKRIHQFVECIKLNKR

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

63.8

40.7

Major BPS

54.3

0.11

1.3

53.1

42.3

Major PPT

0.41

61.4

34.9

Minor 5ss

31.4

-2.1

3.3

42.6

44.4

Minor BPS

60.5

0.41

1.9

76.24

46.2

Associated Gene:

Gene:

ABHD6

Ensembl Gene ID:

ENSAPLG00000010234

Chromosome:

PEDO01019889.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010662

74 - 4003

3930