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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019894.1_17565_24494_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17565 - 24494

Intron Length:

6930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCGTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTTAT

U12 Branch Point Sequence:

CCCCCCTTATAG

Flanking Amino Acid:

SNPGDFTLSVRRNDEVTHIK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

66.5

0.41

1.1

57.2

40.1

Major PPT

70.5

0.46

0.8

63.6

31.4

Minor 5ss

39.7

-1.2

2.9

52.1

44.7

Minor BPS

46.5

-0.4

1.8

45.55

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016114

Chromosome:

PEDO01019894.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041160

8447 - 36217

27771

ENSAPLT00000037504

8447 - 24757

16311

ENSAPLT00000016844

9743 - 24757

15015