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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019894.1_24618_36209_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24618 - 36209

Intron Length:

11592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGATGT

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

TGCTACTCACGT

Flanking Amino Acid:

MVRWFHPNISGI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

72.5

39.9

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

79.9

0.67

0.8

73.6

31.4

Minor 5ss

38.3

-1.3

3.4

56.2

Minor BPS

43.3

-0.4

2.2

61.75

47.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016114

Chromosome:

PEDO01019894.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041160

8447 - 36217

27771