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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019894.1_6309_6961_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6309 - 6961

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGA|GCAGGCCGG

5'SS Class:

weak_major

3'SS Sequence:

CCGCTCACCGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GCTGACAAAACC

Flanking Amino Acid:

LRCFTRTVAMTVTTGTS*

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.1

0.14

1.3

44.6

42.9

Major BPS

66.3

0.4

1.1

41.8

Major PPT

47.2

-0.1

1.6

50.5

32.6

Minor 5ss

26.8

-2.7

4.1

42.8

Minor BPS

42.6

-0.5

2.1

52.79

44.3

Associated Gene:

Gene:

RNF223

Ensembl Gene ID:

ENSAPLG00000001586

Chromosome:

PEDO01019894.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001579

5570 - 6984

1415