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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019894.1_64635_64930_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

64635 - 64930

Intron Length:

296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTGAGCAGG

5'SS Class:

weak_major

3'SS Sequence:

CTGTCCCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCAAA

U12 Branch Point Sequence:

AAAGCCCCAGCC

Flanking Amino Acid:

IGGAPEDQMAAVAERTAATG

Intron Amino Acid Position:

1555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.3

0.17

1.4

50.6

47.7

Major BPS

45.1

-0.3

1.2

48.3

32.9

Major PPT

73.2

0.52

0.8

69.9

30.9

Minor 5ss

34.3

-1.8

2.8

35.2

41.4

Minor BPS

40.8

-0.7

48.51

40.5

Associated Gene:

Gene:

AGRN

Ensembl Gene ID:

ENSAPLG00000015625

Chromosome:

PEDO01019894.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016306

57630 - 91845

34216