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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019894.1_70504_70682_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70504 - 70682

Intron Length:

179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCTCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CTTTCCTCACCT

Flanking Amino Acid:

ITVKHVGQCHESITHTSHSA

Intron Amino Acid Position:

1009

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.2

39.6

Major BPS

72.4

0.56

73.5

32.5

Major PPT

74.8

0.56

0.8

31.5

Minor 5ss

30.5

-2.2

2.8

37.9

39.5

Minor BPS

64.8

0.54

1.9

84.08

42.8

Associated Gene:

Gene:

AGRN

Ensembl Gene ID:

ENSAPLG00000015625

Chromosome:

PEDO01019894.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016306

57630 - 91845

34216