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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019894.1_74182_74314_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
74182 - 74314

Intron Length:
133

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTGAGCACG

5'SS Class:
major

3'SS Sequence:
GCTGTCCCGCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTGAG

U12 Branch Point Sequence:
CTGCCCTGAGCA

Flanking Amino Acid:
FTCLAVPRSPVCGSDGVTYA

Intron Amino Acid Position:
756

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1
62.7
43.4

Major BPS
47
-0.1
1.5
42.6
40.4

Major PPT
63.1
0.3
1
54.7
41.4

Minor 5ss
34.7
-1.7
2.8
42
44.3

Minor BPS
50.3
0.01
1.8
61.89
43.9

Associated Gene:

Gene:
AGRN

Ensembl Gene ID:

Chromosome:
PEDO01019894.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

57630 - 91845
34216