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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019894.1_77672_81311_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

77672 - 81311

Intron Length:

3640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCACC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

TCTTCCTCTCCC

Flanking Amino Acid:

PVPVKHSGPCDLGTPSPCVS

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

71.5

38.5

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

78.7

0.65

0.7

72.6

25.6

Minor 5ss

40.8

-1

2.8

50.5

Minor BPS

41.1

-0.7

3.7

66.89

44.8

Associated Gene:

Gene:

AGRN

Ensembl Gene ID:

ENSAPLG00000015625

Chromosome:

PEDO01019894.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016306

57630 - 91845

34216