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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019909.1_12350_15806_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12350 - 15806

Intron Length:

3457

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCAGGCGGC

5'SS Class:

major

3'SS Sequence:

CCCCTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

AGCGCCCTACGG

Flanking Amino Acid:

AVAISQKMDLPDPTAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.2

67.1

38.1

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

81.2

0.7

75.5

26.5

Minor 5ss

26.7

-2.7

4.4

40.8

Minor BPS

38.2

-1

2.1

38.59

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025250

Chromosome:

PEDO01019909.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029029

12330 - 15978

3649