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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019909.1_9602_10373_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
9602 - 10373

Intron Length:
772

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTGAGTGAA

5'SS Class:
strong_major

3'SS Sequence:
CTCGCCCCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTCAC

U12 Branch Point Sequence:
TCTCCTTTCACT

Flanking Amino Acid:
QEPENPHTQRINKLVEYYQQ

Intron Amino Acid Position:
137

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.4
0.76
0.9
73.7
32.5

Major BPS
77.7
0.69
1
81
30.2

Major PPT
73.1
0.52
0.8
65.6
30.3

Minor 5ss
26.1
-2.7
2.9
22.6
37.5

Minor BPS
64.8
0.55
1.8
80.9
41.2

Associated Gene:

Gene:
DCTN4

Ensembl Gene ID:

Chromosome:
PEDO01019909.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1418 - 12990
11573

1418 - 12990
11573