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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019983.1_628_1651_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

628 - 1651

Intron Length:

1024

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGGGC

5'SS Class:

major

3'SS Sequence:

CCTCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCCAT

U12 Branch Point Sequence:

TGCCGCTGACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

59.7

39.4

Major BPS

52.1

0.05

1.2

62.1

35.8

Major PPT

71.8

0.49

0.7

65.2

23.5

Minor 5ss

23.1

-3.1

3.4

32.1

42.7

Minor BPS

43.4

-0.5

2.1

53.35

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028501

Chromosome:

PEDO01019983.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020162

21 - 3214

3194