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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019988.1_19550_20001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19550 - 20001

Intron Length:

452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

TCTGTGGTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAA

U12 Branch Point Sequence:

TGTGTGTAAACC

Flanking Amino Acid:

EYLLKWKGFSDEDNTWEPEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.1

40.7

Major BPS

57.5

0.19

1.4

61.7

43.1

Major PPT

75.4

0.57

68.6

42.1

Minor 5ss

34.3

-1.8

3.2

40.1

Minor BPS

45.9

-0.3

2.4

61.92

43.9

Associated Gene:

Gene:

CBX1

Ensembl Gene ID:

ENSAPLG00000007894

Chromosome:

PEDO01019988.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033258

19374 - 23025

3652

ENSAPLT00000008207

16768 - 21566

4799