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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019988.1_20790_21421_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20790 - 21421

Intron Length:

632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGGCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

AGCCCCCTAACT

Flanking Amino Acid:

SSGELMFLMKWKNSDEADLV

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

67.6

37.6

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

68.7

0.42

0.9

61.9

34.9

Minor 5ss

27.7

-2.6

29.4

36.9

Minor BPS

59.5

0.38

1.7

73.92

42.1

Associated Gene:

Gene:

CBX1

Ensembl Gene ID:

ENSAPLG00000007894

Chromosome:

PEDO01019988.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033258

19374 - 23025

3652

ENSAPLT00000008207

16768 - 21566

4799