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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019988.1_34411_34479_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34411 - 34479

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGGAC

5'SS Class:

major

3'SS Sequence:

CTCTGTCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCCCCCTCACCC

Flanking Amino Acid:

AGHDQGAPAADRGRHLQALR

Intron Amino Acid Position:

455

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

65.3

34.3

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

79.2

0.66

0.8

31.9

Minor 5ss

24.2

-3

3.3

28.4

Minor BPS

46.2

-0.3

1.9

51.61

45.6

Associated Gene:

Gene:

CDK5RAP3

Ensembl Gene ID:

ENSAPLG00000018896

Chromosome:

PEDO01019988.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047622

34217 - 38201

3985

ENSAPLT00000023879

33853 - 37457

3605