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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019988.1_34652_35036_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34652 - 35036

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

GCTGCCTTCCCC

Flanking Amino Acid:

RNQFLDELMEVRGPRERAAA

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.8

43.8

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

74.4

0.55

0.7

65.8

30.3

Minor 5ss

33.3

-1.9

2.8

39.7

45.9

Minor BPS

39.3

-0.8

3.6

58.37

46.7

Associated Gene:

Gene:

CDK5RAP3

Ensembl Gene ID:

ENSAPLG00000018896

Chromosome:

PEDO01019988.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023879

33853 - 37457

3605