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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019988.1_35569_35858_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35569 - 35858

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGCGTGCG

5'SS Class:

major

3'SS Sequence:

GTCCTCGCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

GTCCTCGCCACA

Flanking Amino Acid:

EVPEQPKEDAIDWGDFTLEP

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

57.3

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

67.7

0.4

0.9

60.5

35.4

Minor 5ss

-2.6

3.2

32.6

42.1

Minor BPS

38.1

-0.9

2.3

41.8

Associated Gene:

Gene:

CDK5RAP3

Ensembl Gene ID:

ENSAPLG00000018896

Chromosome:

PEDO01019988.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047622

34217 - 38201

3985

ENSAPLT00000023879

33853 - 37457

3605