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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019988.1_36004_36119_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

36004 - 36119

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCGCG

5'SS Class:

major

3'SS Sequence:

CGGCGCCCCCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

TGACACTGAAGT

Flanking Amino Acid:

YEACVEFVCESSAEPVLPLL

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

56.7

42.7

Major BPS

0.3

34.1

Major PPT

58.1

0.18

0.9

46.6

36.7

Minor 5ss

29.8

-2.3

3.4

47.1

Minor BPS

47.4

-0.1

1.9

65.75

43.6

Associated Gene:

Gene:

CDK5RAP3

Ensembl Gene ID:

ENSAPLG00000018896

Chromosome:

PEDO01019988.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047622

34217 - 38201

3985

ENSAPLT00000023879

33853 - 37457

3605