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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019988.1_36611_36701_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36611 - 36701

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

CGCCGCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAG

U12 Branch Point Sequence:

CGTGGGTCAGCT

Flanking Amino Acid:

ALYEKENTYLAELASLLVRS

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

56.7

42.7

Major BPS

48.8

-0

1.5

57.1

41.8

Major PPT

61.8

0.27

0.9

53.6

Minor 5ss

33.3

-1.9

35.1

Minor BPS

35.2

-1

2.5

52.32

48.2

Associated Gene:

Gene:

CDK5RAP3

Ensembl Gene ID:

ENSAPLG00000018896

Chromosome:

PEDO01019988.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047622

34217 - 38201

3985

ENSAPLT00000023879

33853 - 37457

3605