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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019988.1_36751_36832_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36751 - 36832

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TGCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCCAC

U12 Branch Point Sequence:

GGCCCTGCCACC

Flanking Amino Acid:

FGRYSSQRMKDWQEIVALYE

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

-0.2

1.4

53.5

Major PPT

71.9

0.49

0.8

65.6

30.3

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

35.9

-1.1

2.2

41.15

38.9

Associated Gene:

Gene:

CDK5RAP3

Ensembl Gene ID:

ENSAPLG00000018896

Chromosome:

PEDO01019988.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023879

33853 - 37457

3605

ENSAPLT00000047622

34217 - 38201

3985