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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019988.1_37161_37285_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37161 - 37285

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTACGGCGG

5'SS Class:

major

3'SS Sequence:

CGCTGTGCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCCGAG

U12 Branch Point Sequence:

GCCCGCCGAGCC

Flanking Amino Acid:

PIDIQTSKLLDWLLDRRHCG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

1.2

46.7

48.6

Major BPS

37.1

-0.8

1.5

27.2

35.5

Major PPT

0.32

56.8

38.7

Minor 5ss

29.6

-2.3

3.4

38.6

46.5

Minor BPS

34.7

-1.1

38.2

39.5

Associated Gene:

Gene:

CDK5RAP3

Ensembl Gene ID:

ENSAPLG00000018896

Chromosome:

PEDO01019988.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023879

33853 - 37457

3605

ENSAPLT00000047622

34217 - 38201

3985