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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019994.1_616_905_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

616 - 905

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CGCCTGCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

CAGCCCTGAGCA

Flanking Amino Acid:

LFQALSLNEESLGNRRIRVD

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

74.9

35.3

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

69.1

0.43

0.9

61.2

35.1

Minor 5ss

27.6

-2.6

32.2

42.5

Minor BPS

-0.1

1.7

55.26

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022192

Chromosome:

PEDO01019994.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032503

475 - 2254

1780