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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020012.1_615_700_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

615 - 700

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACGCCC

5'SS Class:

major

3'SS Sequence:

GTGTCCCCGGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CATCCCCTCACT

Flanking Amino Acid:

SYRNVLDHFPAVGQGRGTRL

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.2

57.4

41.8

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

0.22

55.5

36.4

Minor 5ss

32.1

-2

3.3

42.6

44.4

Minor BPS

49.6

0.05

2.1

71.55

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027042

Chromosome:

PEDO01020012.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028550

21 - 1496

1476