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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020053.1_4440_6155_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4440 - 6155

Intron Length:

1716

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTTTCTGTA

5'SS Class:

weak_major

3'SS Sequence:

TTAAACGATTTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATTAAAC

Flanking Amino Acid:

HQNNGFFNPNSDLTFLSAFR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.5

0.04

1.4

59.2

39.7

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

59.5

0.22

1.1

55.9

44.2

Minor 5ss

46.7

-0.3

2.9

63.1

41.8

Minor BPS

69.1

0.58

1.7

78.78

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016582

Chromosome:

PEDO01020053.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039347

4380 - 15126

10747