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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01020053.1_6304_7369_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6304 - 7369

Intron Length:

1066

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTGATTAATA

Flanking Amino Acid:

DPLYLVDVFSDWHRKDPSVH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.9

90.9

28.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.72

0.8

80.7

31.3

Minor 5ss

40.3

-1.1

3.2

59.2

45.4

Minor BPS

64.2

0.44

80.44

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016582

Chromosome:

PEDO01020053.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039347

4380 - 15126

10747